Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.06■□□□□ 0.16
Raet1bO08603 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.06■□□□□ 0.16
Raet1bO08603 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1bO08603 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Raet1bO08603 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Raet1bO08603 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.05■□□□□ 0.16
Raet1bO08603 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.05■□□□□ 0.16
Raet1bO08603 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.05■□□□□ 0.16
Raet1bO08603 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Raet1bO08603 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1bO08603 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.05■□□□□ 0.16
Raet1bO08603 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Fst-202ENSMUST00000223640 2612 ntBASIC16.04■□□□□ 0.16
Raet1bO08603 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Raet1bO08603 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.04■□□□□ 0.16
Raet1bO08603 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.04■□□□□ 0.16
Raet1bO08603 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Raet1bO08603 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Tgds-204ENSMUST00000228543 1594 ntBASIC16.04■□□□□ 0.16
Raet1bO08603 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1bO08603 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.04■□□□□ 0.16
Raet1bO08603 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Raet1bO08603 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1bO08603 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Raet1bO08603 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Raet1bO08603 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1bO08603 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1bO08603 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1bO08603 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.02■□□□□ 0.16
Raet1bO08603 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Raet1bO08603 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Raet1bO08603 Gm37179-201ENSMUST00000194862 823 ntBASIC16.02■□□□□ 0.16
Raet1bO08603 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Raet1bO08603 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.02■□□□□ 0.16
Raet1bO08603 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1bO08603 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1bO08603 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.02■□□□□ 0.15
Raet1bO08603 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Raet1bO08603 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Raet1bO08603 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Raet1bO08603 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Raet1bO08603 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Raet1bO08603 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Raet1bO08603 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Raet1bO08603 Gm13148-201ENSMUST00000118892 745 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms