Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Raet1aO08602 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1aO08602 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1aO08602 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1aO08602 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1aO08602 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1aO08602 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.06■□□□□ 0.16
Raet1aO08602 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.06■□□□□ 0.16
Raet1aO08602 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1aO08602 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raet1aO08602 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Raet1aO08602 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Raet1aO08602 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.05■□□□□ 0.16
Raet1aO08602 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.05■□□□□ 0.16
Raet1aO08602 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.05■□□□□ 0.16
Raet1aO08602 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Raet1aO08602 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1aO08602 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.05■□□□□ 0.16
Raet1aO08602 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Fst-202ENSMUST00000223640 2612 ntBASIC16.04■□□□□ 0.16
Raet1aO08602 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Raet1aO08602 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.04■□□□□ 0.16
Raet1aO08602 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.04■□□□□ 0.16
Raet1aO08602 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Raet1aO08602 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 Tgds-204ENSMUST00000228543 1594 ntBASIC16.04■□□□□ 0.16
Raet1aO08602 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1aO08602 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.04■□□□□ 0.16
Raet1aO08602 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Raet1aO08602 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1aO08602 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Raet1aO08602 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Raet1aO08602 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1aO08602 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1aO08602 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1aO08602 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.02■□□□□ 0.16
Raet1aO08602 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Raet1aO08602 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Raet1aO08602 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Raet1aO08602 Gm37179-201ENSMUST00000194862 823 ntBASIC16.02■□□□□ 0.16
Raet1aO08602 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Raet1aO08602 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.02■□□□□ 0.16
Raet1aO08602 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1aO08602 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1aO08602 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.02■□□□□ 0.15
Raet1aO08602 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Raet1aO08602 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms