Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gm38205-201ENSMUST00000192243 258 ntBASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.53■□□□□ 0.24
Shisa8J3QNX5 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.53■□□□□ 0.24
Shisa8J3QNX5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shisa8J3QNX5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.52■□□□□ 0.24
Shisa8J3QNX5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shisa8J3QNX5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shisa8J3QNX5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shisa8J3QNX5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Mir7075-201ENSMUST00000184187 82 ntBASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.5■□□□□ 0.23
Shisa8J3QNX5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shisa8J3QNX5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shisa8J3QNX5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms