Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Gm11927-201ENSMUST00000118472 759 ntBASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Gm5643-201ENSMUST00000117081 966 ntBASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
9930021J03RikH3BKP8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Gm20760-201ENSMUST00000179197 648 ntBASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
9930021J03RikH3BKP8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Gm10252-201ENSMUST00000209541 832 ntBASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
9930021J03RikH3BKP8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
9930021J03RikH3BKP8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
9930021J03RikH3BKP8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
9930021J03RikH3BKP8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms