Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh1F7BJK1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh1F7BJK1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh1F7BJK1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Gm26833-201ENSMUST00000180899 440 ntBASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh1F7BJK1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Gm43017-201ENSMUST00000198296 752 ntBASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdh1F7BJK1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms