Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Pcdh11xF6ZNL5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdh11xF6ZNL5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdh11xF6ZNL5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Pcdh11xF6ZNL5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh11xF6ZNL5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Gm13148-201ENSMUST00000118892 745 ntBASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdh11xF6ZNL5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh11xF6ZNL5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh11xF6ZNL5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdh11xF6ZNL5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Gm44544-201ENSMUST00000207052 1844 ntBASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh11xF6ZNL5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh11xF6ZNL5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms