Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Atf6F6VAN0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.61■□□□□ 0.57
Atf6F6VAN0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.61■□□□□ 0.57
Atf6F6VAN0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf6F6VAN0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.6■□□□□ 0.57
Atf6F6VAN0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Gm22325-201ENSMUST00000158904 308 ntBASIC18.6■□□□□ 0.57
Atf6F6VAN0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.6■□□□□ 0.57
Atf6F6VAN0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf6F6VAN0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf6F6VAN0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Atf6F6VAN0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.58■□□□□ 0.57
Atf6F6VAN0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf6F6VAN0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.57■□□□□ 0.56
Atf6F6VAN0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.57■□□□□ 0.56
Atf6F6VAN0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf6F6VAN0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.56■□□□□ 0.56
Atf6F6VAN0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.56■□□□□ 0.56
Atf6F6VAN0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.56■□□□□ 0.56
Atf6F6VAN0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf6F6VAN0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms