Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh17E9PXF0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh17E9PXF0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh17E9PXF0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Gm715-201ENSMUST00000117865 831 ntBASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdh17E9PXF0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Rarb-207ENSMUST00000225921 2756 ntBASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh17E9PXF0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh17E9PXF0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh17E9PXF0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh17E9PXF0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh17E9PXF0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdh17E9PXF0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh17E9PXF0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms