Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.3■□□□□ 0.52
Col6a3E9PWQ3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col6a3E9PWQ3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a3E9PWQ3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Mir1668-201ENSMUST00000184114 107 ntBASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col6a3E9PWQ3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Gm1401-201ENSMUST00000122048 772 ntBASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a3E9PWQ3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Rps4l-201ENSMUST00000071745 943 ntBASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a3E9PWQ3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm15165-201ENSMUST00000118140 502 ntBASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm14822-201ENSMUST00000122247 291 ntBASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm4995-201ENSMUST00000117247 432 ntBASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a3E9PWQ3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a3E9PWQ3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms