Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm18032-201ENSMUST00000222541 538 ntBASIC16.14■□□□□ 0.17
Dchs1E9PVD3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Dchs1E9PVD3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Dchs1E9PVD3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Dchs1E9PVD3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Dchs1E9PVD3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Fst-202ENSMUST00000223640 2612 ntBASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Gm43183-201ENSMUST00000200632 547 ntBASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Dchs1E9PVD3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Gm18025-201ENSMUST00000221733 862 ntBASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Dchs1E9PVD3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.11■□□□□ 0.17
Dchs1E9PVD3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Dchs1E9PVD3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.1■□□□□ 0.17
Dchs1E9PVD3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Dchs1E9PVD3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.1■□□□□ 0.17
Dchs1E9PVD3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Dchs1E9PVD3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Dchs1E9PVD3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.1■□□□□ 0.17
Dchs1E9PVD3 Gm11927-201ENSMUST00000118472 759 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.09■□□□□ 0.17
Dchs1E9PVD3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Dchs1E9PVD3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Dchs1E9PVD3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Dchs1E9PVD3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Dchs1E9PVD3 Gm17661-201ENSMUST00000170317 270 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms