Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.33■□□□□ 0.84
Ccdc78D3Z5T1 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.33■□□□□ 0.84
Ccdc78D3Z5T1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc78D3Z5T1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc78D3Z5T1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc78D3Z5T1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc78D3Z5T1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc78D3Z5T1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Gm10252-201ENSMUST00000209541 832 ntBASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc78D3Z5T1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc78D3Z5T1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc78D3Z5T1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc78D3Z5T1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms