Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Shank1D3YZU1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Gm9103-201ENSMUST00000119371 405 ntBASIC16.19■□□□□ 0.18
Shank1D3YZU1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.19■□□□□ 0.18
Shank1D3YZU1 Mir6349-201ENSMUST00000184059 97 ntBASIC16.19■□□□□ 0.18
Shank1D3YZU1 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
Shank1D3YZU1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.18■□□□□ 0.18
Shank1D3YZU1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Shank1D3YZU1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.16■□□□□ 0.18
Shank1D3YZU1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Shank1D3YZU1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shank1D3YZU1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms