Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.54■□□□□ 0.72
Ptchd4B9EKX1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Mir2861-201ENSMUST00000175539 82 ntBASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd4B9EKX1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Gm43799-201ENSMUST00000201845 579 ntBASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Gm9987-201ENSMUST00000069768 567 ntBASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd4B9EKX1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptchd4B9EKX1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptchd4B9EKX1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptchd4B9EKX1 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd4B9EKX1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Odf3b-204ENSMUST00000227834 930 ntBASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd4B9EKX1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Gm6433-201ENSMUST00000118634 875 ntBASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Timm23-208ENSMUST00000226683 750 ntBASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd4B9EKX1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd4B9EKX1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd4B9EKX1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms