Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.02■□□□□ 0.8
Herc3A6H6S0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herc3A6H6S0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Herc3A6H6S0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Herc3A6H6S0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Herc3A6H6S0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Herc3A6H6S0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20■□□□□ 0.79
Herc3A6H6S0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Herc3A6H6S0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Herc3A6H6S0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Gm26524-201ENSMUST00000192339 390 ntBASIC20■□□□□ 0.79
Herc3A6H6S0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Herc3A6H6S0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Herc3A6H6S0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herc3A6H6S0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Gm37179-201ENSMUST00000194862 823 ntBASIC19.97■□□□□ 0.79
Herc3A6H6S0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herc3A6H6S0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Mir5133-201ENSMUST00000174955 77 ntBASIC19.96■□□□□ 0.79
Herc3A6H6S0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc3A6H6S0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Gm44549-201ENSMUST00000208351 577 ntBASIC19.95■□□□□ 0.78
Herc3A6H6S0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc3A6H6S0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Herc3A6H6S0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms