Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ttc38A3KMP2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ttc38A3KMP2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.73■□□□□ 0.75
Ttc38A3KMP2 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ttc38A3KMP2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ttc38A3KMP2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ttc38A3KMP2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
Ttc38A3KMP2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ttc38A3KMP2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Ttc38A3KMP2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ttc38A3KMP2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms