Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn1aA2APX8 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.07■□□□□ 0.64
Scn1aA2APX8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.06■□□□□ 0.64
Scn1aA2APX8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn1aA2APX8 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.05■□□□□ 0.64
Scn1aA2APX8 Gm12382-201ENSMUST00000122005 922 ntBASIC19.05■□□□□ 0.64
Scn1aA2APX8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn1aA2APX8 Gm37292-201ENSMUST00000192062 758 ntBASIC19.05■□□□□ 0.64
Scn1aA2APX8 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.05■□□□□ 0.64
Scn1aA2APX8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Mir5122-201ENSMUST00000175004 89 ntBASIC19.04■□□□□ 0.64
Scn1aA2APX8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn1aA2APX8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn1aA2APX8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.02■□□□□ 0.64
Scn1aA2APX8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Scn1aA2APX8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Scn1aA2APX8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Scn1aA2APX8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Scn1aA2APX8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.01■□□□□ 0.63
Scn1aA2APX8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Scn1aA2APX8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19■□□□□ 0.63
Scn1aA2APX8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19■□□□□ 0.63
Scn1aA2APX8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Scn1aA2APX8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19■□□□□ 0.63
Scn1aA2APX8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms