Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc112A0AUP1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc112A0AUP1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc112A0AUP1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc112A0AUP1 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Gm22325-201ENSMUST00000158904 308 ntBASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc112A0AUP1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc112A0AUP1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc112A0AUP1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc112A0AUP1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.64■□□□□ 0.9
Ccdc112A0AUP1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc112A0AUP1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc112A0AUP1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc112A0AUP1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc112A0AUP1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc112A0AUP1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc112A0AUP1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.64■□□□□ 0.89
Ccdc112A0AUP1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms