Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm13168-201ENSMUST00000121771 632 ntBASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm8520-201ENSMUST00000186517 868 ntBASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mindy4b-psA0A1W2P7H6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gm13158-201ENSMUST00000122007 736 ntBASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gm18666-201ENSMUST00000190039 958 ntBASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gm5643-201ENSMUST00000117081 966 ntBASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Gm22240-201ENSMUST00000175225 82 ntBASIC19.1■□□□□ 0.65
Mindy4b-psA0A1W2P7H6 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms