Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm5580A0A0N4SVP8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm5580A0A0N4SVP8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm5580A0A0N4SVP8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm5580A0A0N4SVP8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm5580A0A0N4SVP8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5580A0A0N4SVP8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm5580A0A0N4SVP8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm5580A0A0N4SVP8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm5580A0A0N4SVP8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms