Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9d-4A0A0G2JG37 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm45102-201ENSMUST00000207427 857 ntBASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav9d-4A0A0G2JG37 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav9d-4A0A0G2JG37 Fst-202ENSMUST00000223640 2612 ntBASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
Trav9d-4A0A0G2JG37 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms