Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.2□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm26571-201ENSMUST00000181399 666 ntBASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm8495-201ENSMUST00000188740 694 ntBASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9n-2A0A0G2JDP3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms