Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trbc1A0A0A6YWV4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbc1A0A0A6YWV4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trbc1A0A0A6YWV4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Fst-202ENSMUST00000223640 2612 ntBASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbc1A0A0A6YWV4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbc1A0A0A6YWV4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.6■□□□□ 0.25
Trbc1A0A0A6YWV4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms