Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6d-5A0A075B6B9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm12251-201ENSMUST00000117893 792 ntBASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-5A0A075B6B9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6d-5A0A075B6B9 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Smad6-203ENSMUST00000179458 273 ntBASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-5A0A075B6B9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav6d-5A0A075B6B9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Gm43137-201ENSMUST00000198052 594 ntBASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-5A0A075B6B9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-5A0A075B6B9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms