Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Gm6659-201ENSMUST00000174752 547 ntBASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav8n-2A0A075B633 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav8n-2A0A075B633 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Gm18959-201ENSMUST00000208954 655 ntBASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav8n-2A0A075B633 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Gm7367-201ENSMUST00000057611 492 ntBASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav8n-2A0A075B633 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Gm27463-201ENSMUST00000183569 57 ntBASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav8n-2A0A075B633 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Notumos-201ENSMUST00000151998 2659 ntBASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav8n-2A0A075B633 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav8n-2A0A075B633 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav8n-2A0A075B633 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav8n-2A0A075B633 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Trav8n-2A0A075B633 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms