Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.75□□□□□ -0.21
Trav7n-4A0A075B620 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7n-4A0A075B620 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Trav7n-4A0A075B620 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7n-4A0A075B620 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav7n-4A0A075B620 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms