Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm23089-201ENSMUST00000178947 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22046-201ENSMUST00000179027 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l10-201ENSMUST00000179053 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26365-201ENSMUST00000179177 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm23767-201ENSMUST00000179278 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm24153-201ENSMUST00000179280 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25597-201ENSMUST00000179388 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l1-201ENSMUST00000179518 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22941-201ENSMUST00000179630 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22631-201ENSMUST00000179656 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25816-201ENSMUST00000179764 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l12-201ENSMUST00000179816 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l14-201ENSMUST00000179875 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l8-201ENSMUST00000179889 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l7-201ENSMUST00000179895 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l5-201ENSMUST00000179927 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l6-201ENSMUST00000179955 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26188-201ENSMUST00000179963 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25471-201ENSMUST00000180126 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26433-201ENSMUST00000180227 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l11-201ENSMUST00000180312 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm23862-201ENSMUST00000180342 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22128-201ENSMUST00000180346 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm28190-201ENSMUST00000189766 722 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm5034-201ENSMUST00000199115 634 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm29759-201ENSMUST00000205860 327 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm44590-201ENSMUST00000206161 391 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm18562-201ENSMUST00000209949 915 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm7495-201ENSMUST00000215099 426 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 AC115750.1-201ENSMUST00000220441 567 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm9762-201ENSMUST00000036976 444 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm24707-201ENSMUST00000082812 107 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22504-201ENSMUST00000082963 139 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm10221-201ENSMUST00000088299 309 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm13928-201ENSMUST00000120326 1732 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Klf5-202ENSMUST00000226784 2852 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm28112-201ENSMUST00000190898 1875 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 AC121094.1-201ENSMUST00000224766 1345 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm25757-201ENSMUST00000103986 123 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm25916-201ENSMUST00000104263 131 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm14981-201ENSMUST00000117325 943 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm14125-202ENSMUST00000120921 756 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm13508-201ENSMUST00000121639 775 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm22882-201ENSMUST00000157749 124 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.86□□□□□ -0.99
Ube3bQ9ES34 Gm17085-201ENSMUST00000165425 502 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms