Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm24790-201ENSMUST00000104285 132 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm13983-201ENSMUST00000118018 865 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm11498-201ENSMUST00000120660 949 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm5456-201ENSMUST00000170706 844 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm20691-201ENSMUST00000176889 333 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm17045-201ENSMUST00000178600 844 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm8183-201ENSMUST00000183134 980 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm27970-201ENSMUST00000184854 407 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm29784-201ENSMUST00000196217 406 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm30708-201ENSMUST00000202183 312 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm7769-201ENSMUST00000212900 933 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm35619-201ENSMUST00000222548 600 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm6575-201ENSMUST00000222946 697 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm24405-201ENSMUST00000083033 167 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Mir674-201ENSMUST00000102421 100 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm26144-201ENSMUST00000104475 132 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm15048-201ENSMUST00000118201 954 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm11318-201ENSMUST00000118640 961 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm11504-201ENSMUST00000120211 173 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm25117-201ENSMUST00000157194 144 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm23674-201ENSMUST00000157473 131 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm25550-201ENSMUST00000158079 128 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Mir6337-201ENSMUST00000184194 105 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm28620-201ENSMUST00000190463 439 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm19087-201ENSMUST00000191430 946 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm24032-201ENSMUST00000083932 159 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Olfr687-201ENSMUST00000098154 938 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdc40Q9DC48 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms