Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm11987-201ENSMUST00000118524 381 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm15989-201ENSMUST00000121895 498 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm6689-201ENSMUST00000130905 481 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm23229-201ENSMUST00000157297 105 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm22080-201ENSMUST00000157591 106 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm22484-201ENSMUST00000157992 306 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm7560-201ENSMUST00000187748 873 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm18995-201ENSMUST00000202981 520 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm18469-201ENSMUST00000208850 439 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm45795-201ENSMUST00000211847 400 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm19709-201ENSMUST00000215403 482 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm18228-201ENSMUST00000217297 1091 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 AC153864.1-201ENSMUST00000218482 523 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm46313-201ENSMUST00000220463 547 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm46379-201ENSMUST00000222551 265 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim42Q9D2H5 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm23946-201ENSMUST00000104423 197 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm13254-201ENSMUST00000118295 654 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm12988-201ENSMUST00000119054 478 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm12433-201ENSMUST00000119659 255 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm15116-201ENSMUST00000122248 663 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Mir5101-201ENSMUST00000175181 83 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm27659-201ENSMUST00000183472 98 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm28573-201ENSMUST00000187821 380 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm28400-201ENSMUST00000191332 380 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm38041-201ENSMUST00000194445 661 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ighv8-16-201ENSMUST00000199258 294 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm18997-201ENSMUST00000216353 822 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm19007-201ENSMUST00000217746 874 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 AC167013.6-201ENSMUST00000226587 1067 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 AC152394.1-201ENSMUST00000227360 1086 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm22043-201ENSMUST00000082993 158 ntBASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms