Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.74□□□□□ -1.49
Scrt1Q99M85 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scrt1Q99M85 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm14893-201ENSMUST00000117904 282 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm15048-201ENSMUST00000118201 954 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm13702-201ENSMUST00000118542 825 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm20432-201ENSMUST00000173716 250 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Mir5112-201ENSMUST00000174897 60 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Mir7669-201ENSMUST00000183442 58 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm29072-201ENSMUST00000191149 678 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm3841-201ENSMUST00000191399 451 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm43383-201ENSMUST00000195981 469 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm44239-201ENSMUST00000204228 271 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm23456-201ENSMUST00000083335 137 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scrt1Q99M85 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.73□□□□□ -1.49
Scrt1Q99M85 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Scrt1Q99M85 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Mir678-201ENSMUST00000102114 84 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm24434-201ENSMUST00000104081 132 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm12242-201ENSMUST00000118824 738 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm12618-201ENSMUST00000121754 483 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms