Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf1Q99LC2 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Cstf1Q99LC2 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm26422-201ENSMUST00000104276 132 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm12565-201ENSMUST00000119004 649 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm25178-201ENSMUST00000122633 325 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm22210-201ENSMUST00000158101 144 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm43215-201ENSMUST00000199108 252 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Cstf1Q99LC2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm25795-201ENSMUST00000104421 132 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm13451-201ENSMUST00000117649 592 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm14613-201ENSMUST00000122239 752 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm15501-202ENSMUST00000140687 625 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm25374-201ENSMUST00000158158 101 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm25717-201ENSMUST00000158631 353 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Gm37328-201ENSMUST00000193191 640 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.56□□□□□ -1.36
Cstf1Q99LC2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Cstf1Q99LC2 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms