Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7780-201ENSMUST00000214787 406 ntBASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Gm43386-201ENSMUST00000199654 4001 ntBASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.73□□□□□ -1.17
Ccdc9Q8VC31 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm7108-201ENSMUST00000118038 3407 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm11928-201ENSMUST00000119323 437 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm13940-201ENSMUST00000121023 301 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm5578-201ENSMUST00000121490 1236 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm13366-201ENSMUST00000122198 970 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm10913-201ENSMUST00000133732 463 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm4956-202ENSMUST00000178869 672 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm29201-201ENSMUST00000189120 431 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm37585-201ENSMUST00000195440 280 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm43226-201ENSMUST00000202438 259 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Gm18363-201ENSMUST00000221671 730 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Ccdc9Q8VC31 AC121844.3-201ENSMUST00000219124 1785 ntBASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 AC144733.2-201ENSMUST00000222552 2292 ntBASIC7.71□□□□□ -1.17
Ccdc9Q8VC31 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm13163-201ENSMUST00000119875 336 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm17973-201ENSMUST00000174509 520 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm6610-201ENSMUST00000186324 358 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm37225-201ENSMUST00000193423 325 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm37724-201ENSMUST00000195240 1221 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm35013-201ENSMUST00000197218 832 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm42452-201ENSMUST00000199749 617 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Ccdc9Q8VC31 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms