Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm6382-201ENSMUST00000118873 942 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm12101-201ENSMUST00000121590 390 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm22235-201ENSMUST00000157085 110 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm5283-201ENSMUST00000177874 334 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm26509-201ENSMUST00000180947 948 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm29605-201ENSMUST00000190800 292 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Ighv1-30-201ENSMUST00000194082 349 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm4556-201ENSMUST00000217808 355 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm18628-201ENSMUST00000220584 475 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm15732-201ENSMUST00000079794 480 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim9Q8C7M3 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm25785-201ENSMUST00000104129 125 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm12040-201ENSMUST00000118357 537 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm5793-201ENSMUST00000119393 630 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm16511-201ENSMUST00000120019 564 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm26486-201ENSMUST00000158021 110 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm17063-201ENSMUST00000168135 456 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm27853-201ENSMUST00000184176 250 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm29288-201ENSMUST00000191582 901 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm44225-201ENSMUST00000203582 186 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm46364-201ENSMUST00000218548 319 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm9321-201ENSMUST00000221179 778 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.1□□□□□ -1.27
Trim9Q8C7M3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim9Q8C7M3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim9Q8C7M3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.09□□□□□ -1.27
Trim9Q8C7M3 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms