Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a6Q8C6K9 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm13626-201ENSMUST00000119435 402 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm22820-201ENSMUST00000157205 329 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm22636-201ENSMUST00000158142 275 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm24957-201ENSMUST00000179604 132 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm8419-201ENSMUST00000189886 412 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm2996-201ENSMUST00000211398 537 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm15781-201ENSMUST00000120216 323 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm11852-201ENSMUST00000120806 222 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm3715-201ENSMUST00000172308 617 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm43794-201ENSMUST00000200971 692 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Gm45850-201ENSMUST00000212536 338 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a6Q8C6K9 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm14331-201ENSMUST00000120396 409 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm12396-201ENSMUST00000121600 306 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm23669-201ENSMUST00000157470 128 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm25487-201ENSMUST00000158725 125 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm7825-201ENSMUST00000204046 416 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm18839-201ENSMUST00000204292 670 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm23343-201ENSMUST00000158964 143 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm37784-201ENSMUST00000193233 189 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms