Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm45635-201ENSMUST00000211516 2134 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.95□□□□□ -0.98
Usp40Q8BWR4 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm13626-201ENSMUST00000119435 402 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm11835-201ENSMUST00000120635 663 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm16557-201ENSMUST00000159182 191 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm8185-201ENSMUST00000160999 669 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm21542-201ENSMUST00000182307 993 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm37463-201ENSMUST00000193819 796 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm4332-201ENSMUST00000196114 346 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm7499-201ENSMUST00000210423 813 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm6562-201ENSMUST00000221903 464 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.94□□□□□ -0.98
Usp40Q8BWR4 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm43719-201ENSMUST00000200088 2199 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm15016-201ENSMUST00000117300 720 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm12442-201ENSMUST00000118372 338 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm16511-201ENSMUST00000120019 564 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm14925-201ENSMUST00000120611 438 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm22655-201ENSMUST00000174949 96 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm7166-201ENSMUST00000199715 303 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm44075-201ENSMUST00000204208 216 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm45127-201ENSMUST00000205984 1015 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 AC114572.1-201ENSMUST00000227262 300 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 AC147628.1-201ENSMUST00000228193 688 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Usp40Q8BWR4 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms