Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ClpbQ60649 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ClpbQ60649 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ClpbQ60649 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ClpbQ60649 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ClpbQ60649 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
ClpbQ60649 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm23748-201ENSMUST00000104227 131 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.32□□□□□ -1.4
ClpbQ60649 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm15349-201ENSMUST00000121154 204 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm13366-201ENSMUST00000122198 970 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm22226-201ENSMUST00000157355 109 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm23756-201ENSMUST00000157582 114 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm25332-201ENSMUST00000158038 105 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm28846-201ENSMUST00000189161 368 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm35323-201ENSMUST00000191836 499 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm7452-201ENSMUST00000200764 788 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm7463-201ENSMUST00000201541 547 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm9267-201ENSMUST00000222831 404 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
ClpbQ60649 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ClpbQ60649 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ClpbQ60649 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ClpbQ60649 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.32□□□□□ -1.4
ClpbQ60649 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ClpbQ60649 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.31□□□□□ -1.4
ClpbQ60649 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
ClpbQ60649 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm15149-201ENSMUST00000119370 360 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm11255-201ENSMUST00000120448 1180 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm13121-201ENSMUST00000120637 632 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm11553-201ENSMUST00000120682 240 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm14613-201ENSMUST00000122239 752 ntBASIC6.31□□□□□ -1.4
ClpbQ60649 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.31□□□□□ -1.4
ClpbQ60649 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ClpbQ60649 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms