Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm45737-201ENSMUST00000208344 1612 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37410-201ENSMUST00000193623 3039 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 AC155270.1-201ENSMUST00000221626 4028 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm25943-201ENSMUST00000103791 90 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm11859-201ENSMUST00000118099 455 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm12833-201ENSMUST00000136112 477 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm23187-201ENSMUST00000175746 86 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm25285-201ENSMUST00000178951 90 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37219-201ENSMUST00000192036 926 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm18865-201ENSMUST00000193011 1171 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm7804-202ENSMUST00000194187 854 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 AC154371.1-201ENSMUST00000226600 412 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm7265-201ENSMUST00000192735 3502 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim41Q5NCC3 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm42973-201ENSMUST00000197913 3200 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm23437-201ENSMUST00000104036 127 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm14879-201ENSMUST00000117308 507 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm13711-201ENSMUST00000119708 453 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm12313-201ENSMUST00000121347 421 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm16362-201ENSMUST00000135189 214 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm16557-201ENSMUST00000159182 191 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm38079-201ENSMUST00000195603 154 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm34583-203ENSMUST00000202586 454 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 AC159472.1-201ENSMUST00000218178 463 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 AC073562.1-201ENSMUST00000222117 401 ntBASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim41Q5NCC3 Gm42755-201ENSMUST00000198533 1493 ntBASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim41Q5NCC3 Gm18537-202ENSMUST00000206215 1503 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms