Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm25320-201ENSMUST00000122551 324 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Mir1983-201ENSMUST00000157523 132 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm26182-201ENSMUST00000157688 116 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm22552-201ENSMUST00000157796 337 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Scarna17-201ENSMUST00000158064 79 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm18709-201ENSMUST00000180564 489 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Snhg7-201ENSMUST00000181621 139 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr1055-202ENSMUST00000188023 939 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm17965-201ENSMUST00000193904 517 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm22711-202ENSMUST00000197029 135 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm43033-201ENSMUST00000199682 425 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm44181-201ENSMUST00000203106 483 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm5154-201ENSMUST00000203971 399 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Mif-ps7-201ENSMUST00000223357 327 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm24035-201ENSMUST00000082867 107 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm24919-201ENSMUST00000083020 106 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm24405-201ENSMUST00000083033 167 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Mir24-2-201ENSMUST00000083607 107 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccbe1Q3MI99 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm13930-201ENSMUST00000118569 368 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm22275-201ENSMUST00000122470 310 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm3025-201ENSMUST00000163454 489 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm5611-201ENSMUST00000164523 852 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm3077-201ENSMUST00000165903 627 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm2878-201ENSMUST00000170173 486 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm20430-201ENSMUST00000172474 207 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Mir7058-201ENSMUST00000184637 75 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm20813-201ENSMUST00000186646 705 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm28356-202ENSMUST00000187566 858 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm21923-201ENSMUST00000188455 696 ntBASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccbe1Q3MI99 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms