Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 AC061963.2-201ENSMUST00000213541 2739 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm25311-201ENSMUST00000104136 132 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm13501-201ENSMUST00000118477 979 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm11920-201ENSMUST00000118491 563 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm14727-201ENSMUST00000118526 525 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm11318-201ENSMUST00000118640 961 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm11357-201ENSMUST00000119758 954 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm14721-201ENSMUST00000121381 525 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm23385-201ENSMUST00000158592 295 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Mir5617-201ENSMUST00000176786 57 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm27864-201ENSMUST00000183704 190 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Mir378d-201ENSMUST00000184232 110 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm4412-201ENSMUST00000186660 433 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm38068-201ENSMUST00000192546 540 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm7369-201ENSMUST00000192738 936 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm34768-201ENSMUST00000193884 565 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Col8a1Q00780 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm7368-201ENSMUST00000213307 367 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm25133-201ENSMUST00000082647 130 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm23970-201ENSMUST00000083319 107 ntBASIC6.15□□□□□ -1.42
Col8a1Q00780 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col8a1Q00780 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Col8a1Q00780 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col8a1Q00780 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a1Q00780 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Col8a1Q00780 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.15□□□□□ -1.43
Col8a1Q00780 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Col8a1Q00780 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.15□□□□□ -1.43
Col8a1Q00780 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a1Q00780 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a1Q00780 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a1Q00780 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col8a1Q00780 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm2065-201ENSMUST00000194697 2757 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.14□□□□□ -1.43
Col8a1Q00780 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.14□□□□□ -1.43
Col8a1Q00780 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Col8a1Q00780 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col8a1Q00780 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms