Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm27970-201ENSMUST00000184854 407 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 AC117797.1-201ENSMUST00000223977 695 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Mir31-201ENSMUST00000083474 106 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm43679-201ENSMUST00000197051 3677 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm15930-201ENSMUST00000156603 2037 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm13998-201ENSMUST00000120952 335 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm11759-201ENSMUST00000121742 464 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm3216-201ENSMUST00000166927 486 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm3141-201ENSMUST00000168726 499 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm18343-201ENSMUST00000172802 604 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm43160-201ENSMUST00000196453 421 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Gm19936-201ENSMUST00000216414 838 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm37525-201ENSMUST00000193499 2871 ntBASIC4.24□□□□□ -1.73
PrkdcP97313 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC4.24□□□□□ -1.73
PrkdcP97313 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PrkdcP97313 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm5406-201ENSMUST00000120054 766 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm22867-201ENSMUST00000157499 109 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm23513-201ENSMUST00000158181 133 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PrkdcP97313 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 AC135119.1-204ENSMUST00000228036 2663 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm27679-201ENSMUST00000184612 84 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PrkdcP97313 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
PrkdcP97313 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm37685-201ENSMUST00000193507 2177 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm22952-201ENSMUST00000116720 120 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm13006-201ENSMUST00000118683 214 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm15490-201ENSMUST00000119894 387 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm25439-201ENSMUST00000158280 131 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Mir6933-201ENSMUST00000184982 81 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 AC153943.1-201ENSMUST00000219312 256 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PrkdcP97313 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 Gm8878-201ENSMUST00000173552 1725 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PrkdcP97313 AC164883.2-201ENSMUST00000227931 3815 ntBASIC4.23□□□□□ -1.73
PrkdcP97313 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms