Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm22781-201ENSMUST00000104083 137 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm18833-201ENSMUST00000173218 862 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm23810-201ENSMUST00000175150 74 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm9517-201ENSMUST00000195021 874 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm29778-201ENSMUST00000201667 466 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.04□□□□□ -1.28
Tpm1P58771 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.04□□□□□ -1.28
Tpm1P58771 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Tpm1P58771 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Tpm1P58771 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Tpm1P58771 AC158981.2-201ENSMUST00000227565 1537 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm23834-201ENSMUST00000104436 129 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm23954-201ENSMUST00000157213 353 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm24130-201ENSMUST00000158536 151 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm16113-201ENSMUST00000159629 372 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm5456-201ENSMUST00000170706 844 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm25640-201ENSMUST00000175378 125 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm17045-201ENSMUST00000178600 844 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm37511-201ENSMUST00000192901 294 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm44342-201ENSMUST00000196874 129 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm44383-201ENSMUST00000198940 129 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 AC164618.3-201ENSMUST00000224863 681 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Tpm1P58771 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm6054-201ENSMUST00000078052 378 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Tpm1P58771 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Tpm1P58771 AC154354.1-201ENSMUST00000224585 2109 ntBASIC7.03□□□□□ -1.28
Tpm1P58771 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Gm43485-201ENSMUST00000199292 1710 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Tpm1P58771 AC155167.2-201ENSMUST00000226127 1945 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Tpm1P58771 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Tpm1P58771 Gm12115-201ENSMUST00000119969 447 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Gm22276-201ENSMUST00000122469 129 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Tpm1P58771 Gm16138-201ENSMUST00000159341 821 ntBASIC7.02□□□□□ -1.29
Tpm1P58771 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Tpm1P58771 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms