Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NcanP55066 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.97□□□□□ -1.29
NcanP55066 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.97□□□□□ -1.29
NcanP55066 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.97□□□□□ -1.29
NcanP55066 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.97□□□□□ -1.29
NcanP55066 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm15531-201ENSMUST00000118062 252 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm13265-201ENSMUST00000118090 421 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm14267-201ENSMUST00000119751 496 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm25271-201ENSMUST00000157273 290 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm22724-201ENSMUST00000158091 127 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 Gm1972-201ENSMUST00000181606 964 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm37681-201ENSMUST00000193880 727 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Gm43105-201ENSMUST00000202987 459 ntBASIC6.97□□□□□ -1.29
NcanP55066 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.97□□□□□ -1.29
NcanP55066 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.97□□□□□ -1.29
NcanP55066 Gm46379-201ENSMUST00000222551 265 ntBASIC6.97□□□□□ -1.29
NcanP55066 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.97□□□□□ -1.29
NcanP55066 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NcanP55066 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
NcanP55066 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NcanP55066 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NcanP55066 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.97□□□□□ -1.29
NcanP55066 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
NcanP55066 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NcanP55066 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.96□□□□□ -1.29
NcanP55066 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.96□□□□□ -1.29
NcanP55066 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
NcanP55066 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NcanP55066 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NcanP55066 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Tmem161b-206ENSMUST00000225069 2414 ntBASIC6.96□□□□□ -1.3
NcanP55066 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.96□□□□□ -1.3
NcanP55066 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC6.96□□□□□ -1.3
NcanP55066 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Gm16200-201ENSMUST00000120385 331 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm24236-201ENSMUST00000157794 134 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm23965-201ENSMUST00000157969 142 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.96□□□□□ -1.3
NcanP55066 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.96□□□□□ -1.3
NcanP55066 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm3650-201ENSMUST00000180600 747 ntBASIC6.96□□□□□ -1.3
NcanP55066 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm28976-201ENSMUST00000188070 144 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm45196-201ENSMUST00000206751 825 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm19182-201ENSMUST00000207139 577 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm17988-201ENSMUST00000208796 535 ntBASIC6.96□□□□□ -1.3
NcanP55066 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm4032-201ENSMUST00000210886 487 ntBASIC6.96□□□□□ -1.3
NcanP55066 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.96□□□□□ -1.3
NcanP55066 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.96□□□□□ -1.3
NcanP55066 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.96□□□□□ -1.3
NcanP55066 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
NcanP55066 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
NcanP55066 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.96□□□□□ -1.3
NcanP55066 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NcanP55066 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms