Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm22235-201ENSMUST00000157085 110 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm22990-201ENSMUST00000175427 89 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm28620-201ENSMUST00000190463 439 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
Rfx3P48381 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm43546-201ENSMUST00000196721 943 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm42713-201ENSMUST00000202709 945 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm45136-201ENSMUST00000205793 943 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm4548-201ENSMUST00000208487 509 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm2754-201ENSMUST00000223383 589 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx3P48381 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx3P48381 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rfx3P48381 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.81□□□□□ -1.48
Rfx3P48381 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Rfx3P48381 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm14614-201ENSMUST00000119873 384 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm4992-201ENSMUST00000120256 768 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm14038-201ENSMUST00000121500 807 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm13642-201ENSMUST00000121697 381 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Rfx3P48381 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm6081-201ENSMUST00000134472 489 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm4997-201ENSMUST00000154056 360 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm22820-201ENSMUST00000157205 329 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm25395-201ENSMUST00000157343 272 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm25556-201ENSMUST00000158077 144 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm9359-201ENSMUST00000163721 1221 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm5456-201ENSMUST00000170706 844 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm26381-201ENSMUST00000174895 92 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm17045-201ENSMUST00000178600 844 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm28846-201ENSMUST00000189161 368 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm8290-201ENSMUST00000218202 477 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 AC153152.2-201ENSMUST00000223165 959 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 AC161275.1-201ENSMUST00000224668 208 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Rfx3P48381 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.8□□□□□ -1.48
Rfx3P48381 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Rfx3P48381 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rfx3P48381 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Rfx3P48381 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms