Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14053-201ENSMUST00000121662 470 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.35□□□□□ -1.07
Rfx1P48377 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm17377-201ENSMUST00000165184 207 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rfx1P48377 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rfx1P48377 Zfp950-206ENSMUST00000178819 171 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm8192-201ENSMUST00000182196 958 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Mir6415-201ENSMUST00000184064 100 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC8.35□□□□□ -1.07
Rfx1P48377 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.35□□□□□ -1.07
Rfx1P48377 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm43558-201ENSMUST00000200155 210 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm44221-201ENSMUST00000203552 388 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Rfx1P48377 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rfx1P48377 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rfx1P48377 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 Gm9973-202ENSMUST00000220926 166 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rfx1P48377 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Gm5446-201ENSMUST00000091762 784 ntBASIC8.35□□□□□ -1.07
Rfx1P48377 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.35□□□□□ -1.07
Rfx1P48377 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Rfx1P48377 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rfx1P48377 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.35□□□□□ -1.07
Rfx1P48377 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Rfx1P48377 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Rfx1P48377 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm43187-201ENSMUST00000200652 2397 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm9403-201ENSMUST00000196299 2181 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm38026-201ENSMUST00000193284 3880 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.34□□□□□ -1.07
Rfx1P48377 Mir763-201ENSMUST00000103249 120 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm9836-201ENSMUST00000117132 216 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm12444-201ENSMUST00000121512 877 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm15730-201ENSMUST00000121828 415 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm24592-201ENSMUST00000122505 106 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm22361-201ENSMUST00000158435 176 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm21045-201ENSMUST00000183058 1020 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm37770-201ENSMUST00000192855 772 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm8861-201ENSMUST00000196346 832 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm8921-201ENSMUST00000204306 649 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm18855-201ENSMUST00000206689 570 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.34□□□□□ -1.07
Rfx1P48377 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.34□□□□□ -1.07
Rfx1P48377 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Rfx1P48377 Gm23407-201ENSMUST00000082538 91 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Olfr654-201ENSMUST00000098173 1155 ntBASIC8.34□□□□□ -1.07
Rfx1P48377 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rfx1P48377 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms