Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Sox18P43680 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gm16394-201ENSMUST00000117289 675 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm12535-201ENSMUST00000121025 484 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox18P43680 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm18779-201ENSMUST00000173444 577 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm24083-201ENSMUST00000175174 120 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm22242-201ENSMUST00000175224 118 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm7094-201ENSMUST00000178379 366 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm26269-201ENSMUST00000180144 126 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm5327-201ENSMUST00000182864 1009 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm28016-201ENSMUST00000184594 196 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm18973-201ENSMUST00000205814 511 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm6702-201ENSMUST00000208496 471 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm17994-201ENSMUST00000209260 533 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.72□□□□□ -1.17
Sox18P43680 AC152946.2-201ENSMUST00000219071 337 ntBASIC7.72□□□□□ -1.17
Sox18P43680 AC131745.1-201ENSMUST00000223660 330 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm4149-201ENSMUST00000099371 276 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Sox18P43680 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gm5120-201ENSMUST00000215231 2414 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 AC163660.3-201ENSMUST00000224253 1563 ntBASIC7.71□□□□□ -1.17
Sox18P43680 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Sox18P43680 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.71□□□□□ -1.17
Sox18P43680 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
Sox18P43680 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Gm42645-201ENSMUST00000201573 1627 ntBASIC7.71□□□□□ -1.17
Sox18P43680 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sox18P43680 Gm37069-201ENSMUST00000192742 4142 ntBASIC7.71□□□□□ -1.17
Sox18P43680 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Sox18P43680 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox18P43680 Gm24472-201ENSMUST00000104484 132 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm14036-201ENSMUST00000118248 480 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm7746-201ENSMUST00000120966 503 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm6689-201ENSMUST00000130905 481 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC7.71□□□□□ -1.18
Sox18P43680 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox18P43680 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox18P43680 Gm23824-201ENSMUST00000158741 276 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm16580-201ENSMUST00000162696 1044 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Sox18P43680 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm23977-201ENSMUST00000177871 74 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox18P43680 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC7.71□□□□□ -1.18
Sox18P43680 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sox18P43680 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms