Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.6□□□□□ -1.19
Traf1P39428 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm11799-201ENSMUST00000116110 460 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm15616-201ENSMUST00000118662 375 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm15621-201ENSMUST00000119162 364 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm7058-201ENSMUST00000119209 902 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm10177-201ENSMUST00000160052 444 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Mir6244-201ENSMUST00000184156 117 ntBASIC7.59□□□□□ -1.19
Traf1P39428 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Gm5694-201ENSMUST00000195648 641 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm43850-201ENSMUST00000202021 578 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm18781-201ENSMUST00000211252 924 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.59□□□□□ -1.19
Traf1P39428 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.59□□□□□ -1.19
Traf1P39428 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Traf1P39428 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm6436-201ENSMUST00000077163 451 ntBASIC7.59□□□□□ -1.19
Traf1P39428 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.59□□□□□ -1.19
Traf1P39428 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Traf1P39428 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Traf1P39428 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Traf1P39428 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Traf1P39428 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Traf1P39428 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Traf1P39428 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC7.59□□□□□ -1.2
Traf1P39428 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Traf1P39428 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.59□□□□□ -1.2
Traf1P39428 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm11462-201ENSMUST00000117749 562 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm14018-201ENSMUST00000119042 455 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm11198-201ENSMUST00000119771 974 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Mir1907-201ENSMUST00000122509 90 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC7.58□□□□□ -1.2
Traf1P39428 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Traf1P39428 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm18006-201ENSMUST00000177411 662 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm3841-201ENSMUST00000191399 451 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm43762-201ENSMUST00000201521 295 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm7554-201ENSMUST00000202282 574 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm18789-201ENSMUST00000216115 550 ntBASIC7.58□□□□□ -1.2
Traf1P39428 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Traf1P39428 Gm21731-201ENSMUST00000079524 489 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Traf1P39428 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.58□□□□□ -1.2
Traf1P39428 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Traf1P39428 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm42727-201ENSMUST00000202446 2823 ntBASIC7.58□□□□□ -1.2
Traf1P39428 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 185.8 ms