Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm14930-201ENSMUST00000118864 652 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm15316-201ENSMUST00000121082 421 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Cdx1P18111 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm17046-201ENSMUST00000168078 850 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx1P18111 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28413-201ENSMUST00000189369 291 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm4322-201ENSMUST00000191094 336 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm7412-201ENSMUST00000191692 605 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdx1P18111 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdx1P18111 AC156574.1-201ENSMUST00000227084 452 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx1P18111 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdx1P18111 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cdx1P18111 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm25760-201ENSMUST00000103989 132 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm7821-201ENSMUST00000117111 788 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm14531-201ENSMUST00000120845 285 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm15538-201ENSMUST00000121410 313 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm22882-201ENSMUST00000157749 124 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm24680-201ENSMUST00000158759 126 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm27218-201ENSMUST00000183745 392 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm44192-201ENSMUST00000204195 556 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm4585-201ENSMUST00000207218 452 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm44582-201ENSMUST00000209125 445 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm6581-201ENSMUST00000214545 260 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Cdx1P18111 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cdx1P18111 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.31□□□□□ -1.56
Cdx1P18111 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm9315-201ENSMUST00000222696 908 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 AC110176.1-201ENSMUST00000226219 504 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cdx1P18111 Gm9800-201ENSMUST00000052615 336 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.31□□□□□ -1.56
Cdx1P18111 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms