Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccl3P10855 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccl3P10855 Gm42636-201ENSMUST00000197174 2239 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 AC159635.1-201ENSMUST00000220905 2102 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccl3P10855 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Mir700-201ENSMUST00000102169 79 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm26067-201ENSMUST00000103789 110 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm22714-201ENSMUST00000116894 78 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm13428-201ENSMUST00000117540 365 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm15332-201ENSMUST00000118386 357 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm11976-201ENSMUST00000119236 295 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm7931-201ENSMUST00000121537 271 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm9597-201ENSMUST00000171913 602 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Mir3097-201ENSMUST00000175356 67 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm19560-201ENSMUST00000177510 514 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm2539-203ENSMUST00000181352 746 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Mir6367-201ENSMUST00000183385 102 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm37376-201ENSMUST00000192176 453 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm6631-201ENSMUST00000193699 559 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm42886-201ENSMUST00000199214 466 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Ccl3P10855 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccl3P10855 Gm7802-201ENSMUST00000216464 262 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.68□□□□□ -1.5
Ccl3P10855 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccl3P10855 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC5.68□□□□□ -1.5
Ccl3P10855 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccl3P10855 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccl3P10855 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccl3P10855 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm14173-201ENSMUST00000117690 278 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm14550-201ENSMUST00000117918 407 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm8855-201ENSMUST00000118888 878 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm5401-201ENSMUST00000122444 365 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ccl3P10855 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm26357-201ENSMUST00000158218 115 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.67□□□□□ -1.5
Ccl3P10855 Mir7008-201ENSMUST00000184398 63 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm3841-201ENSMUST00000191399 451 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm37784-201ENSMUST00000193233 189 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.67□□□□□ -1.5
Ccl3P10855 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccl3P10855 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccl3P10855 Gm43945-201ENSMUST00000203595 754 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms