Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.6□□□□□ -1.35
Hoxa9P09631 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.6□□□□□ -1.35
Hoxa9P09631 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm25346-201ENSMUST00000104509 128 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm13702-201ENSMUST00000118542 825 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm12630-201ENSMUST00000121575 784 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm29197-201ENSMUST00000185922 702 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm18952-201ENSMUST00000194471 846 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.59□□□□□ -1.35
Hoxa9P09631 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm45448-201ENSMUST00000211739 209 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 AC112680.2-201ENSMUST00000213119 595 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.59□□□□□ -1.35
Hoxa9P09631 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxa9P09631 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Hoxa9P09631 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
Hoxa9P09631 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxa9P09631 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxa9P09631 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Hoxa9P09631 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxa9P09631 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxa9P09631 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Hoxa9P09631 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxa9P09631 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.58□□□□□ -1.36
Hoxa9P09631 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxa9P09631 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxa9P09631 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxa9P09631 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm13835-201ENSMUST00000118459 685 ntBASIC6.58□□□□□ -1.36
Hoxa9P09631 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm11902-201ENSMUST00000118849 270 ntBASIC6.58□□□□□ -1.36
Hoxa9P09631 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.58□□□□□ -1.36
Hoxa9P09631 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms