Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3103-201ENSMUST00000198073 752 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm45899-201ENSMUST00000212196 1276 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm35619-201ENSMUST00000222548 600 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 AC139569.1-201ENSMUST00000226080 614 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 AC140451.1-201ENSMUST00000227984 737 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.15□□□□□ -1.59
Hmgb3O54879 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Hmgb3O54879 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmgb3O54879 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm25311-201ENSMUST00000104136 132 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm25379-201ENSMUST00000104338 114 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm11903-201ENSMUST00000118958 727 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm13754-201ENSMUST00000120486 998 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm12459-201ENSMUST00000120659 356 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm22702-201ENSMUST00000175372 69 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC5.14□□□□□ -1.59
Hmgb3O54879 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm37620-201ENSMUST00000192910 501 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm8860-201ENSMUST00000193160 445 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 AC154515.3-201ENSMUST00000225081 1159 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Diaph3-204ENSMUST00000226254 682 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm8995-201ENSMUST00000184842 7280 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.14□□□□□ -1.59
Hmgb3O54879 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hmgb3O54879 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hmgb3O54879 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hmgb3O54879 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.13□□□□□ -1.59
Hmgb3O54879 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms