Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm12075-201ENSMUST00000117426 397 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm12392-201ENSMUST00000118014 938 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm14645-201ENSMUST00000118597 417 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm11198-201ENSMUST00000119771 974 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm23111-201ENSMUST00000122652 105 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm3160-201ENSMUST00000128343 607 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm3102-201ENSMUST00000164236 489 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm17064-201ENSMUST00000167690 452 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm2951-201ENSMUST00000169447 490 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm21181-201ENSMUST00000186249 330 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm7200-201ENSMUST00000188426 1163 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm38061-201ENSMUST00000192490 365 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm18843-201ENSMUST00000194982 719 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm43013-201ENSMUST00000198216 247 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm8921-201ENSMUST00000204306 649 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm8209-201ENSMUST00000206386 553 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm5119-201ENSMUST00000215858 634 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh1F7BJK1 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm11905-201ENSMUST00000117653 678 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm12225-201ENSMUST00000117995 298 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm13501-201ENSMUST00000118477 979 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm16418-201ENSMUST00000118577 171 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm14212-201ENSMUST00000122023 826 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm15928-201ENSMUST00000122455 280 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm2930-201ENSMUST00000170403 474 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms